Research
Therapeutic targets for HIV-1 infection in the host proteome
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* Corresponding authors: Dietrich A Stephan dstephan@tgen.org - Fatah Kashanchi bcmfxk@gwumc.edu
- † Equal contributors
1 Department of Biochemistry and Molecular Biology, George Washington University School of Medicine, Washington, DC 20037, USA
2 Neurogenomics Division, Translational Genomics Research Institute, Phoenix, AZ 85004, USA
3 Institute for Genetic Medicine, Johns Hopkins Medical School, Baltimore, MD 21205, USA
4 Institute of Signal Processing, Tampere University of Technology, PO Box 553, 33101, Tampere, Finland
5 The Institute for Genomic Research, TIGR, Rockville, MD 20850, USA
Retrovirology 2005, 2:20 doi:10.1186/1742-4690-2-20
Published: 21 March 2005Additional files
Additional File 5:
Self-organizing map (SOM) for filter 1 (refer to Methods)
Format: JPEG Size: 42KB Download file
Additional File 6:
Self-organizing map (SOM) for filter 2 (refer to Methods)
Format: JPEG Size: 42KB Download file
Additional File 7:
K-means clustering (15 graphs and corresponding close-ups shown)
Format: PPT Size: 183KB Download file
This file can be viewed with: Microsoft PowerPoint Viewer
Additional File 4:
Gene lists filtered for all absent in pCep4 samples and at least 2 present calls in eTat samples (Excel worksheet, "2P"), 4 present calls in eTat samples (Excel worksheet, "4P"), and 8 present calls in eTat samples (Excel spreadsheet, "8P")
Format: XLS Size: 67KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional File 1:
GEO accession numbers for each sample
Format: XLS Size: 21KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional File 3:
K-means clustering gene lists (three Excel worksheets, "set1–5," "set6–10," "set11–15")
Format: XLS Size: 2.1MB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional File 2:
Self-organizing map (SOM) gene lists for the first and third filters (two Excel worksheets, "HIV_SOM_Filt_1a" & "HIV_SOM_Filt_3a")
Format: XLS Size: 260KB Download file
This file can be viewed with: Microsoft Excel Viewer