Table 3

QPCR measuring mmu-miRNAs encoded by Pvt1.

Tumor #

miR-1204

miR-1205

miR-1206

miR-1207-5p

miR-1207-3p

miR-1208

14

34.54

44.58

BT

29.03

ND

38.96

16

36.35

44.34

36.09

30.39

ND

39.42

20

34.06

42.24

BT

27.92

ND

38.78

21

34.6

39.73

BT

28.39

ND

39.63

22

33.06

41.13

BT

29.6

ND

37.3

23

35.46

42.13

BT

30.07

ND

39.06

31

35.2

39.56

BT

28.43

34.26

38.57

32

35.87

38.65

BT

30.07

34.93

38.9

34

33.3

38.59

BT

28.86

35.3

41.44

35

33.72

42.19

BT

29.91

34.3

ND

36

35.83

40.16

BT

30.85

35.47

39.5

39

33.16

42.44

BT

30.89

35.52

41.3

40

35.05

38.94

BT

31.14

40.16

45.52

41

34.95

43.62

BT

31.15

37.2

40.39

42

34.2

41.75

BT

29.44

35.64

40

43

33.92

40.13

BT

29.45

35.91

40.73

44

36.9

39.98

BT

31.34

36.45

42.1

45

33.36

41.07

BT

27.25

34.72

38.81

46

35.04

42.21

BT

28.93

36.1

41.29

Average ± STD

34.66 ± 1.12

41.23 ± 1.82

ND

29.64 ± 1.17

35.84 ± 1.54

40.09 ± 1.83

C2

38.02

42.23

BT

30.28

36.93

40.53

C3

33.53

41.93

BT

26.98

34.6

39.36

C4

36.19

41.1

BT

29.3

35.45

39.62

C5

36.03

45.22

BT

30.23

ND

39.23

C6.2

ND

37.35

ND

ND

40.31

40.36

C6.3

36.9

42.82

BT

31.77

38.64

41.73

C7

37.08

BT

BT

32.11

ND

41.11

C8

36.51

43.14

BT

30.89

ND

39.55

C9

37.15

44.73

BT

30.86

ND

40.32

C 10

36.8

45.2

BT

30.4

ND

39.26

Average ± STD

36.47 ± 1.25

42.64 ± 2.47

BT

30.31 ± 1.51

37.19 ± 2.33

40.11 ± 0.85

thymus

35.01

34.41

BT

33.06

38.17

43.4

spleen

34.05

40.3

BT

31.03

36.4

41.97

Reject H0

yes

no

no

no

no

Numbers in the first column correspond to the tumour numbers in the Table 1; other columns represent the cycle numbers needed to reach a predetermined threshold. BT, below threshold; ND, not done; STD, standard deviation. A cycle number of 30 corresponds to approximately 3000 molecules per cell.

Beck-Engeser et al. Retrovirology 2008 5:4   doi:10.1186/1742-4690-5-4