Table 2

Most representated protein motifs in the Tat interactome dataset.

Motif

N Dataset

% Dataset

% Nucleus

RRM

16

8.4

6.3

HELIC

16

8.4

4.4

DEXDc

16

8.4

3.8

AAA

12

6.3

1.4

BROMO

10

5.2

1.5

HMG

10

5.2

1.9

SANT

8

4.2

1.4

WD40

7

3.7

3.4

PHD

5

2.6

3.2

DSRM

5

2.6

0.7

The number of appearance and percentage of each of the motifs are shown. N Dataset: Number of proteins in Tat interactome dataset possessing motif annotation. % Dataset: percentage of proteins in Tat interactome dataset possessing motif annotation. % Nucleus: percentage of proteins in Nuclear Protein Database (NPD) possessing motif annotation.

Gautier et al. Retrovirology 2009 6:47   doi:10.1186/1742-4690-6-47