Table 5

Primers used to generate XPR1 mutants.

Mutant

Primer sequence (5'→3')

GenBank number


KPYK, ESTV

1F: AAATCCAGATTTTGGCTGCTCAA (1315-1337)

1R: GCAGGCACTGGATGAAGCGAA (1583-1603)

2F: TTCGCTTCATCCAGTGCCTGC (1583-1603)

2R: AAGAGACCCCAGTCCATCTTGA (1799-1820)

NM_011273


S505P

F: CACGAAGAACAAAATCACCCTGACACCGTGGTGTTCT (1705-1741)

R: AGAACACCACGGTGTCAGGGTGATTTTGTTCTTCGTG (1705-1741)

NM_011273


T507Y

F: AGAACAAAATCACTCTGACTACGTGGTGTTCTTTTA

CCTGTGG (1710-1752)

R: CCACAGGTAAAAGAACACCACGTAGTCAGAGTGATT

TTGTTCT (1710-1752)

NM_011273


P505S

F: CACAAAGAACAAAATCACTCTGACTACAAGGTGTTC

(1495-1530)

R: GAACACCTTGTAGTCAGAGTGATTTTGTTCTTTGTG

(1495-1530)

EF606903


Y507T

F: AGAACAAAATCACCCTGACACCAAGGTGTTCTTTTA

CCTGTGG (1500-1542)

R: CCACAGGTAAAAGAACACCTTGGTGTCAGGGTGATT

TTGTTCT (1500-1542)

EF606903


TV

F: AGAACAAAATCACCCTGACACCGTGGTGTTCTTTTAC

CTGTGG (1500-1542)

R: CCACAGGTAAAAGAACACCACGGTGTCAGGGTGATT

TTGTTCT (1500-1542)

EF606903


Underlined letters represent introduced base substitutions. Numbers in parentheses indicate the position of each primer in the indicated GenBank sequence.

Yan et al. Retrovirology 2009 6:87   doi:10.1186/1742-4690-6-87

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