Additional file 5.

IFD binding mode of raltegravir at the SIVmac251 catalytic site in complex with proviral DNA. Molecular surfaces are shown for IN (gray), catalytic loop (residues 140-149; cyan), metal ions (magenta), 3'-DNA strand (green), and 5'-DNA strand (yellow). This figure was prepared using PyMOL [73].

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Lewis et al. Retrovirology 2010 7:21   doi:10.1186/1742-4690-7-21