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1:

Exceptional molecular and coreceptor-requirement properties of molecular clones isolated from an Human Immunodeficiency Virus Type-1 subtype C infection.

Dash PK, Siddappa NB, Mangaiarkarasi A, Mahendarkar AV, Roshan P, Anand KK, Mahadevan A, Satishchandra P, Shankar SK, Prasad VR, Ranga U.

Retrovirology. 2008 Mar 7;5:25.

PMID: 18328091 [PubMed - indexed for MEDLINE]

2:

A comprehensive panel of near-full-length clones and reference sequences for non-subtype B isolates of human immunodeficiency virus type 1.

Gao F, Robertson DL, Carruthers CD, Morrison SG, Jian B, Chen Y, Barré-Sinoussi F, Girard M, Srinivasan A, Abimiku AG, Shaw GM, Sharp PM, Hahn BH.

J Virol. 1998 Jul;72(7):5680-98.

PMID: 9621027 [PubMed - indexed for MEDLINE]

3:

Coreceptor usage of primary human immunodeficiency virus type 1 isolates varies according to biological phenotype.

Björndal A, Deng H, Jansson M, Fiore JR, Colognesi C, Karlsson A, Albert J, Scarlatti G, Littman DR, Fenyö EM.

J Virol. 1997 Oct;71(10):7478-87.

PMID: 9311827 [PubMed - indexed for MEDLINE]

4:

Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G.

Jeeninga RE, Hoogenkamp M, Armand-Ugon M, de Baar M, Verhoef K, Berkhout B.

J Virol. 2000 Apr;74(8):3740-51.

PMID: 10729149 [PubMed - indexed for MEDLINE]

5:

Persistence of attenuated rev genes in a human immunodeficiency virus type 1-infected asymptomatic individual.

Iversen AK, Shpaer EG, Rodrigo AG, Hirsch MS, Walker BD, Sheppard HW, Merigan TC, Mullins JI.

J Virol. 1995 Sep;69(9):5743-53.

PMID: 7637019 [PubMed - indexed for MEDLINE]

6:

Characterization of V3 sequence heterogeneity in subtype C human immunodeficiency virus type 1 isolates from Malawi: underrepresentation of X4 variants.

Ping LH, Nelson JA, Hoffman IF, Schock J, Lamers SL, Goodman M, Vernazza P, Kazembe P, Maida M, Zimba D, Goodenow MM, Eron JJ Jr, Fiscus SA, Cohen MS, Swanstrom R.

J Virol. 1999 Aug;73(8):6271-81.

PMID: 10400718 [PubMed - indexed for MEDLINE]

7:

Complete nucleotide sequence, genome organization, and biological properties of human immunodeficiency virus type 1 in vivo: evidence for limited defectiveness and complementation.

Li Y, Hui H, Burgess CJ, Price RW, Sharp PM, Hahn BH, Shaw GM.

J Virol. 1992 Nov;66(11):6587-600.

PMID: 1404605 [PubMed - indexed for MEDLINE]

8:

Characterisation of near-full length genome sequences of three South African human immunodeficiency virus type 1 subtype C isolates.

Hunt GM, Papathanasopoulos MA, Gray GE, Tiemessen CT.

Virus Genes. 2003 Jan;26(1):49-56.

PMID: 12680693 [PubMed - indexed for MEDLINE]

9:

Frequent intrapatient recombination between human immunodeficiency virus type 1 R5 and X4 envelopes: implications for coreceptor switch.

Mild M, Esbjörnsson J, Fenyö EM, Medstrand P.

J Virol. 2007 Apr;81(7):3369-76. Epub 2007 Jan 24.

PMID: 17251288 [PubMed - indexed for MEDLINE]

10:

HIV-1 subtype C syncytium- and non-syncytium-inducing phenotypes and coreceptor usage among Ethiopian patients with AIDS.

Abebe A, Demissie D, Goudsmit J, Brouwer M, Kuiken CL, Pollakis G, Schuitemaker H, Fontanet AL, Rinke de Wit TF.

AIDS. 1999 Jul 30;13(11):1305-11.

PMID: 10449282 [PubMed - indexed for MEDLINE]

11:

Evolution of DC-SIGN use revealed by fitness studies of R5 HIV-1 variants emerging during AIDS progression.

Borggren M, Repits J, Kuylenstierna C, Sterjovski J, Churchill MJ, Purcell DF, Karlsson A, Albert J, Gorry PR, Jansson M.

Retrovirology. 2008 Mar 27;5:28.

PMID: 18371209 [PubMed - indexed for MEDLINE]

12:

Near full-length clones and reference sequences for subtype C isolates of HIV type 1 from three different continents.

Rodenburg CM, Li Y, Trask SA, Chen Y, Decker J, Robertson DL, Kalish ML, Shaw GM, Allen S, Hahn BH, Gao F; UNAIDS and NIAID Networks for HIV Isolation and Characterization.

AIDS Res Hum Retroviruses. 2001 Jan 20;17(2):161-8.

PMID: 11177395 [PubMed - indexed for MEDLINE]

13:

Patterns of chemokine receptor fusion cofactor utilization by human immunodeficiency virus type 1 variants from the lungs and blood.

Singh A, Besson G, Mobasher A, Collman RG.

J Virol. 1999 Aug;73(8):6680-90.

PMID: 10400765 [PubMed - indexed for MEDLINE]

15:

The heterosexual human immunodeficiency virus type 1 epidemic in Thailand is caused by an intersubtype (A/E) recombinant of African origin.

Gao F, Robertson DL, Morrison SG, Hui H, Craig S, Decker J, Fultz PN, Girard M, Shaw GM, Hahn BH, Sharp PM.

J Virol. 1996 Oct;70(10):7013-29.

PMID: 8794346 [PubMed - indexed for MEDLINE]

16:

Molecular cloning and analysis of functional envelope genes from human immunodeficiency virus type 1 sequence subtypes A through G. The WHO and NIAID Networks for HIV Isolation and Characterization.

Gao F, Morrison SG, Robertson DL, Thornton CL, Craig S, Karlsson G, Sodroski J, Morgado M, Galvao-Castro B, von Briesen H, Beddows S, Weber J, Sharp PM, Shaw GM, Hahn BH.

J Virol. 1996 Mar;70(3):1651-67.

PMID: 8627686 [PubMed - indexed for MEDLINE]

17:

Phenotypic and genotypic comparisons of CCR5- and CXCR4-tropic human immunodeficiency virus type 1 biological clones isolated from subtype C-infected individuals.

Pollakis G, Abebe A, Kliphuis A, Chalaby MI, Bakker M, Mengistu Y, Brouwer M, Goudsmit J, Schuitemaker H, Paxton WA.

J Virol. 2004 Mar;78(6):2841-52.

PMID: 14990703 [PubMed - indexed for MEDLINE]

18:

Coreceptor tropism in human immunodeficiency virus type 1 subtype D: high prevalence of CXCR4 tropism and heterogeneous composition of viral populations.

Huang W, Eshleman SH, Toma J, Fransen S, Stawiski E, Paxinos EE, Whitcomb JM, Young AM, Donnell D, Mmiro F, Musoke P, Guay LA, Jackson JB, Parkin NT, Petropoulos CJ.

J Virol. 2007 Aug;81(15):7885-93. Epub 2007 May 16.

PMID: 17507467 [PubMed - indexed for MEDLINE]

20:

Role of HIV-1 subtype C envelope V3 to V5 regions in viral entry, coreceptor utilization and replication efficiency in primary T-lymphocytes and monocyte-derived macrophages.

Sundaravaradan V, Das SR, Ramakrishnan R, Sehgal S, Gopalan S, Ahmad N, Jameel S.

Virol J. 2007 Nov 24;4:126.

PMID: 18036244 [PubMed - indexed for MEDLINE]

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